Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919368.1_cds_XP_016468583.1_61204
CDS Infomation

[gene=LOC107791101] [db_xref=GeneID:107791101] [protein=protein trichome birefringence-like] [protein_id=XP_016468583.1] [location=complement(join(53036..53387,53580..53738,53833..54026,54131..54323,54667..55712))] [gbkey=CDS]
Sequence

ATGGCTGAAACAGCAAAATATGCACCTATTAATGGTGGAACTCTGGTTACAGACTTGAAA
ACTCACTTCTCACTTCTCAAAACCAAAAGAAGTATTGCATGTGCATATGGTTTTGTGTTT
GTTTTCATTGTTGTCACCACTTTCTTGGCTTTTACTCCTAATCCTAATAACTCTTCTTCT
CCATGGTTTACTAACATTTTATCATTAAGCACTAGCAGAGAAGAAGATGGGACTTATAGA
TCTCACTTCTCTTCAATTTTCTCTAACCTTTTCCCAAATAATGTTCCAAAAACTTCAAAC
ACCAAATTTGAGCAACCCCATTTGAATAAAGAGCCATCAATTGGTCAAAAACATACTCAT
AATAATGAGTCTCATGATAAAGTTGGAATCTTGGAAAAGCCCTTTAATCAAAGTGCAATT
TTGGACCCAAAGCCTTATGTAAATGTTACTTTACTAACAAATTCTTCTGTGTTGAGTTAT
AAAGAATCCTCAGTTGTGAAGAATCAGACTCAAAGTAAAGATTTTGATGATAAAGTTGGA
ATCTTGAAGGCAAATCAGAGTGCAATTCAGGCTGCTAACTCTCCTTTGAATGTGAATCAG
ACACAAAGTAAAAATTTTGATGATAAAGTTGGAATTTTGAAGGCAAATCAGAGGATAATT
CAGGCTACAAAGTCTCCAGTTAATGTGAATCAGACTGAAAATTCAGTACCAAAATCCTCT
TCTGGGGACAAAAGTGCAAACGGGAATGGAGAAAAGGGAATTATAGAGAAGGAAGTGAAG
AAAAATTTCACTTCTTCTTTGGTGAAGAAGCAGAGAAATGGGACAAATTTGGATGTGTCA
GTGAAGAAAGGAGATGAAGATTTGGTTAAGTCTTTGTTGAATTGTGATTTCTTTGATGGG
AATTGGGTGACAGATGAGTCTTATCCTTTGTACAAACCTGGTTCTTGTTCTCTTATTGAT
GAGCAATTCAATTGTGTTGTCAATGGTAGGCCTGATAGTGGTTACTTAAAGATGAAATGG
AAGCCCAAGGCCTGCAGTCTTCCCAGATTGAATGCCACTCATATGCTGGAATTATTAAGA
GGTAAGCGGCTGGCATTCGTTGGTGATTCTCTCAATAGGAACATGTGGGAATCCCTTATT
TGCACTCTTAGAAACTCCGTCAAAGATCAGAAAAAGGTTTATGAAGAATTTGGAAGACAC
CATTTCAGGACAGAAGCTTCGTATTCATTTATATTTGAAGACTATAAATGCAGAGTGGAG
TTCTTTGTGTCTCCTTTCTTGGTTCAACAATGGGAAGTTGCAGATAAAAAAGGAGGGAAG
AAGGAAACGCTTCGGCTTGATTTGATTGGAGAGTCTGCTGAGAAGTATAAAAATGCAGAT
ATCATAGTCTTCAACACCGGTCACTGGTGGACTCATGAGAAGACTTCCTTAGGGAAAGAC
TATTATCAAGAAGGAAGTCATGTGCACCGCCAACTAAATGTGGTTGAGGCCTTTCGAAAA
GCATTAACAACATGGGGAAGATGGGTCGATGCTCATATAAATCCCAAAAAGACAGTTGTT
CTCTTCAGAGGTTATTCTGCTTCTCATTTCAGTGGCGGGCAATGGAATTCTGGCGGGGCG
TGTGACAGTGAAACGGAGCCAATAAAGAACGACACATATTTGACACCGTATCCATCCAAG
ATGACAGTATTAGAGCAAGTCTTCAAAGGAATGAAAACTCAAGTTTCCTATCTCAATATC
ACAAGAATGTCAGACTATAGAAAAGACGGTCACCCATCGATATATAGGAAGCCGAATTTG
ACAGACAAGGAAAGGAAATCACAATGGAGGTATCAAGATTGCAGCCATTGGTGCCTCCCT
GGTGTACCTGATGCTTGGAATGAGCTGTTATATGCTGAACTTTTGGCAAGACAACACCAG
AGACAACAGCAGAAAAAGTCATAG

Peptide Sequence

PEP ID

XP_016468583.1
PEP Infomation

PREDICTED: protein trichome birefringence-like [Nicotiana tabacum]
Sequence

MAETAKYAPINGGTLVTDLKTHFSLLKTKRSIACAYGFVFVFIVVTTFLAFTPNPNNSSS
PWFTNILSLSTSREEDGTYRSHFSSIFSNLFPNNVPKTSNTKFEQPHLNKEPSIGQKHTH
NNESHDKVGILEKPFNQSAILDPKPYVNVTLLTNSSVLSYKESSVVKNQTQSKDFDDKVG
ILKANQSAIQAANSPLNVNQTQSKNFDDKVGILKANQRIIQATKSPVNVNQTENSVPKSS
SGDKSANGNGEKGIIEKEVKKNFTSSLVKKQRNGTNLDVSVKKGDEDLVKSLLNCDFFDG
NWVTDESYPLYKPGSCSLIDEQFNCVVNGRPDSGYLKMKWKPKACSLPRLNATHMLELLR
GKRLAFVGDSLNRNMWESLICTLRNSVKDQKKVYEEFGRHHFRTEASYSFIFEDYKCRVE
FFVSPFLVQQWEVADKKGGKKETLRLDLIGESAEKYKNADIIVFNTGHWWTHEKTSLGKD
YYQEGSHVHRQLNVVEAFRKALTTWGRWVDAHINPKKTVVLFRGYSASHFSGGQWNSGGA
CDSETEPIKNDTYLTPYPSKMTVLEQVFKGMKTQVSYLNITRMSDYRKDGHPSIYRKPNL
TDKERKSQWRYQDCSHWCLPGVPDAWNELLYAELLARQHQRQQQKKS

Transcript Sequence

Gene sequence data has not been registered.